He currently plays for Cancun FC, wearing the number 3 shirt. He plays primarily as a Defender. He stands at 177cm tall and weighs 76kg. His current market value is estimated at 250K €.

His most recent move was a from Pioneros de Cancún to Cancun FC on 2023-12-31.

Throughout the Mexico Ascenso MX 2025-2026, Jonathan Hernandez featured in 20 matches, averaging 0 tackles, 0 interceptions, and 0 clearances per game, while blocking 0 shots per game.